College of Liberal Arts & Sciences

Student Seminars 2014-2015

May 7, 2015 Shipra Malhotra (Karanicolas Lab)
David Johnson (Karanicolas Lab)
Xi Cheng (Im Lab)
April 30, 2015 Pushpa Itagi (Lab Rotation)
Yusuf Adeshina (Lab Rotation)
Pallavi Biswas (Lab Rotation)
April 23, 2015 Seonghoon Kim (Lab Rotation)
Huijing Wang (Lab Rotation)
Cali Thomas (Lab Rotation)
April 16, 2015 Jiaqin Li (Egan Lab)
Hongjing Ma (Im Lab)
April 9, 2015 Ryan Syderman (Deeds Lab)
April 2, 2015 Jumin Lee (Im Lab)
Ragul Gowthaman (Karanicolas Lab)
March 26, 2015 Saveliy Belkin (Vakser Lab) - Docking of PPI inhibitors to protein-bound structures
March 12, 2015 Karen Khar (Karanicolas Lab)
Varsha Badal (Vakser Lab) - Analysis of text-mining predictions
March 5, 2015 Jimmy Budiardjo (Karanicolas Lab) - Full and Partial Agonism of a Designed Allosteric Effector Site
February 26, 2015 Ivan Anishchenko (Vakser Lab) - Benchmarking of protein-protein docking on a set of model structures
February 19, 2015 Pallavi Biswas (Lab Rotation)
Yusuf Adeshina (Lab Rotation)
February 12, 2015 Pushpa Itagi (Lab Rotation) - LPS Micelle System
Cali Thomas (Lab Rotation)
February 5, 2015 Seonghoon Kim (Lab Rotation) - Molecular Dynamics Studies of Lipid I and Lipid II in Various of Lipid Bilayer Environments
Huijing Wang (Lab Rotation)
January 29, 2015 Dr. Wonpil Im
December 12, 2014 Jiaqin Li (Egan Lab) - Allosteric signaling of AraC family transcriptional activators
December 5, 2014 Ragul Gowthaman (Karanicolas Lab) - DARC 2.0 : Docking Approach by Ray Casting improvements lead to better performance
Saveliy Belkin (Vakser Lab) - Systematic Study of Potential Modulators of Protein-Protein Interactions
November 21, 2014 Pushpa Itagi (Lab Rotation) - Structure prediction of circular permutants using Rosetta- AbinitioRelax
Huijing Wang (Lab Rotation)
Seonghoon Kim (Lab Rotation) -Molecular Modeling Studies of Lipid A for Various of Gram-negative Bacteria
November 14, 2014 Cali Thomas (Lab Rotation) - Macromolecular Self-Assembly Pathways
Yusuf Adeshina (Lab Rotation) - Mechanisms of Persister Cell Formation
Pallavi Guha Biswas (Lab Rotation)
November 7, 2014 Xi Cheng (Im Lab) - Solid-State NMR Observable-based Ensemble Dynamics Simulations of Membrane Protein in Explicit Membrane
Karen Khar (Karanicolas Lab) - Structure Function Rescue of p53
October 31, 2014 Jimmy Budiardjo (Karanicolas Lab) - Full and Partial Agonsim of a Designed Allosteric Effector Site
Jumin Lee (Im Lab) - Molecular Dynamics Studies for the Sugar Transportation Mechanism in Phosphotransferase Systems (PTSs)
October 17, 2014 Hongjing Ma (Im Lab) - Glycan Reader Modification and Glycan Database Design
October 10, 2014 Ryan Suderman (Deeds Lab) - Phenotypic properties of scaffold-based signaling paradigms
Varsha Badal (Vakser Lab) - Methodology for query formation and feature selection in text-mining for PPI
October 3, 2014 Michael Rowland (Deeds Lab) - Dissertation: Crosstalk, Network Dynamics, and the Evolution of Signaling
September 26, 2014 David Johnson (Karanicolas Lab) - Exemplar based virtual screening of Protein-Protein interactions
September 19, 2014 Shipra Malhotra (Karanicolas Lab) - What Factors Dictate Preservation of a Ligand’s Bound Pose upon Med Chem Optimization?
September 12, 2014 Ivan Anishchenko (Vakser Lab) - Protein models in docking by structure alignment
September 5, 2014 Andrew Beaven (Im Lab) - Ion Channel Regulation by Lipid Bilayers: Theory & Simulation of Deformed Membranes Around a Protein
August 29, 2014 Introduction by the incoming students

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